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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15382362_15383669_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15382362 - 15383669

Intron Length:

1308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

TGTGCTCTGACT

Flanking Amino Acid:

ALLVCVLILIVLVLLILTLK

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

75.3

34.6

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

84.7

0.78

0.7

76.8

31.9

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

55.9

0.27

1.8

76.55

40.2

Associated Gene:

Gene:

CDH22

Ensembl Gene ID:

ENSAPLG00000012691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031042

15381823 - 15435106

53284

ENSAPLT00000013267

15381823 - 15421329

39507

ENSAPLT00000044206

15381823 - 15435106

53284