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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15411205_15412033_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15411205 - 15412033

Intron Length:

829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CCTGTTGTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAT

U12 Branch Point Sequence:

ATGTGGCTAATT

Flanking Amino Acid:

TQEAVITVQKPLDYESKKVH

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.5

26.8

Major BPS

71.5

0.53

1.1

43.2

Major PPT

74.6

0.55

0.9

71.9

Minor 5ss

24.3

-3

3.1

28.7

43.6

Minor BPS

43.4

-0.4

2.5

66.55

44.6

Associated Gene:

Gene:

CDH22

Ensembl Gene ID:

ENSAPLG00000012691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031042

15381823 - 15435106

53284

ENSAPLT00000013267

15381823 - 15421329

39507

ENSAPLT00000044206

15381823 - 15435106

53284