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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15420830_15420938_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15420830 - 15420938

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTCAGTGTT

5'SS Class:

major

3'SS Sequence:

GTCCCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TCCTCCCTGACT

Flanking Amino Acid:

FCLLSSECVSGTSVMQVMAS

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.3

77.9

36.8

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

71.9

0.49

0.9

36.3

Minor 5ss

34.2

-1.8

3.3

46.9

42.8

Minor BPS

65.5

0.57

1.7

79.98

42.2

Associated Gene:

Gene:

CDH22

Ensembl Gene ID:

ENSAPLG00000012691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013267

15381823 - 15421329

39507