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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15420830_15425998_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15420830 - 15425998

Intron Length:

5169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTACC

5'SS Class:

strong_major

3'SS Sequence:

GTCCCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TCCTCCCTGACT

Flanking Amino Acid:

LGGSTVPALRGTSVMQVMAS

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

74.9

35.3

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

71.9

0.49

0.9

36.3

Minor 5ss

30.2

-2.3

2.9

36.9

40.4

Minor BPS

65.5

0.57

1.7

79.98

42.2

Associated Gene:

Gene:

CDH22

Ensembl Gene ID:

ENSAPLG00000012691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031042

15381823 - 15435106

53284