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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15496188_15496877_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15496188 - 15496877

Intron Length:

690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TTTCTTTCCACA

Flanking Amino Acid:

LTLSIAGIFKEICVLFLATH

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.6

37.2

Major BPS

0.65

1.1

77.4

37.3

Major PPT

87.8

0.85

0.6

83.8

24.5

Minor 5ss

32.4

-2

3.4

46.7

48.6

Minor BPS

-0

1.9

68.33

38.3

Associated Gene:

Gene:

SLC35C2

Ensembl Gene ID:

ENSAPLG00000012587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036930

15495932 - 15498206

2275

ENSAPLT00000028330

15495163 - 15498206

3044

ENSAPLT00000013141

15495680 - 15498424

2745