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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15527356_15527510_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15527356 - 15527510

Intron Length:

155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGGCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TCAGACTTCATA

Flanking Amino Acid:

PPMSRGAPPPGMMGPPPGMR

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

78.6

0.71

79.6

32.9

Major PPT

68.7

0.42

1.1

71.8

38.4

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

46.5

-0.2

56.55

43.1

Associated Gene:

Gene:

SNRPB

Ensembl Gene ID:

ENSAPLG00000011875

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012363

15525473 - 15527641

2169