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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15539027_15539568_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15539027 - 15539568

Intron Length:

542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CTTTTCTGATTC

Flanking Amino Acid:

LAIIQGPPGTGKTYVGLKIV

Intron Amino Acid Position:

822

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

72.9

31.2

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

88.7

0.87

0.7

83.2

31.9

Minor 5ss

28.5

-2.5

2.8

31.7

36.2

Minor BPS

53.9

0.1

1.7

66.34

39.9

Associated Gene:

Gene:

ZNFX1

Ensembl Gene ID:

ENSAPLG00000011206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029003

15535359 - 15548151

12793

ENSAPLT00000011686

15535359 - 15548245

12887