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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15540982_15541199_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15540982 - 15541199

Intron Length:

218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

TGACTCTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TGACTCTTCATA

Flanking Amino Acid:

AAEDIEAENPGGQQEREEEQ

Intron Amino Acid Position:

1003

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

70.4

0.46

0.9

36.1

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

50.9

0.02

1.7

62.01

38.2

Associated Gene:

Gene:

ZNFX1

Ensembl Gene ID:

ENSAPLG00000011206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029003

15535359 - 15548151

12793

ENSAPLT00000011686

15535359 - 15548245

12887