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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15543488_15544192_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15543488 - 15544192

Intron Length:

705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

CCTTCCTCAAGA

Flanking Amino Acid:

DFPFVRLKYQHRMRPEIAQL

Intron Amino Acid Position:

1269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

75.8

33.6

Major BPS

73.1

0.58

73.8

32.3

Major PPT

83.1

0.74

0.9

80.3

37.3

Minor 5ss

34.3

-1.8

3.2

43.2

38.3

Minor BPS

57.4

0.23

1.9

67.11

45.4

Associated Gene:

Gene:

ZNFX1

Ensembl Gene ID:

ENSAPLG00000011206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011686

15535359 - 15548245

12887