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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15558003_15558569_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15558003 - 15558569

Intron Length:

567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

TCCTGTATAATC

Flanking Amino Acid:

RGLIYRQRKYRLGSVQPGST

Intron Amino Acid Position:

681

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

84.3

0.77

0.8

81.1

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

47.4

-0.2

58.11

41.8

Associated Gene:

Gene:

EPB42

Ensembl Gene ID:

ENSAPLG00000010867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011328

15557852 - 15565656

7805