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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15574924_15576625_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15574924 - 15576625

Intron Length:

1702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

AATGCTGTGACT

Flanking Amino Acid:

LLQDPFLTIKVFGPTVVHKA

Intron Amino Acid Position:

613

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

31.3

Major BPS

0.47

1.2

69.9

35.3

Major PPT

85.5

0.8

0.6

81.7

23.2

Minor 5ss

39.9

-1.1

3.2

57.4

46.8

Minor BPS

48.9

-0

2.1

69.63

41.7

Associated Gene:

Gene:

TGM6

Ensembl Gene ID:

ENSAPLG00000010591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032149

15573819 - 15591754

17936

ENSAPLT00000026878

15573819 - 15590312

16494

ENSAPLT00000025272

15573819 - 15588114

14296

ENSAPLT00000011037

15573819 - 15588692

14874

ENSAPLT00000043380

15573819 - 15588692

14874