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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15587179_15590237_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15587179 - 15590237

Intron Length:

3059

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGT|GCCAGTATC

5'SS Class:

weak_major

3'SS Sequence:

TTGGCAATCCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACATCAA

U12 Branch Point Sequence:

TAGCCCTGAAAA

Flanking Amino Acid:

GLCVPWLKCSLNKAAHHTSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.9

0.21

1.4

76.1

35.9

Major BPS

57.7

0.19

1.1

Major PPT

54.1

0.09

1.1

50.3

42.1

Minor 5ss

27.4

-2.6

3.7

38.5

39.3

Minor BPS

56.8

0.21

1.6

64.99

40.4

Associated Gene:

Gene:

TGM6

Ensembl Gene ID:

ENSAPLG00000010591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026878

15573819 - 15590312

16494