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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1560117_1564384_F

Intron Information:

Intron Rank:

130868

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1560117 - 1564384

Intron Length:

4268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTGCT

5'SS Class:

major

3'SS Sequence:

TCCCCACATGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATGAG

U12 Branch Point Sequence:

TGTTCCCCACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.2

69.9

40.9

Major BPS

60.7

0.27

1.6

59.7

46.7

Major PPT

57.4

0.17

1.1

56.9

31.6

Minor 5ss

39.8

-1.1

3.4

59.5

44.9

Minor BPS

46.2

-0.2

2.2

71.57

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029006

1559831 - 1565450

5620