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Intron Name: Anas_platyrhynchos_platyrhynchos_21_159700_160373_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159700 - 160373

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATCAT

U12 Branch Point Sequence:

TTCCTCTGCACA

Flanking Amino Acid:

SEHCHQQFKERSVIVENSAS

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.7

33.5

Major BPS

70.5

0.51

1.3

41.2

Major PPT

75.8

0.58

0.9

71.5

Minor 5ss

27.9

-2.5

3.5

37.1

47.5

Minor BPS

49.1

-0

1.9

65.1

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014666

145170 - 162852

17683