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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1651068_1651224_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1651068 - 1651224

Intron Length:
157

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGGGCACG

5'SS Class:
major

3'SS Sequence:
TTTTTTTTAATAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AATTAAC

U12 Branch Point Sequence:
TTTTTTTTAATA

Flanking Amino Acid:
ARSLLRCRRAGIPAPVVYFV

Intron Amino Acid Position:
118

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.6
0.58
1
62.3
43.9

Major BPS
73.1
0.57
0.9
73.7
27.1

Major PPT
86.6
0.82
0.7
85.3
27.9

Minor 5ss
32.9
-2
3.1
39.9
45.9

Minor BPS
82.2
1.01
0.9
86.33
25.3

Associated Gene:

Gene:
TP53RK

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1650716 - 1651854
1139