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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1658134_1667825_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1658134 - 1667825

Intron Length:

9692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCCGGC

5'SS Class:

major

3'SS Sequence:

GTTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

AATACCACATCT

Flanking Amino Acid:

VPVLLSLPPKEGRCLYVILL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.2

0.34

1.3

53.3

45.2

Major BPS

82.2

0.8

0.9

81.6

Major PPT

86.7

0.83

0.8

81.1

30.9

Minor 5ss

41.2

-1

3.5

59.3

45.4

Minor BPS

45.5

-0.2

66.43

43.3

Associated Gene:

Gene:

SLC13A3

Ensembl Gene ID:

ENSAPLG00000009083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009500

1657435 - 1685031

27597