Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_1672214_1672905_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1672214 - 1672905

Intron Length:

692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

GACTGTTTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

ACTGTTTTAAAG

Flanking Amino Acid:

TELQFLASTEDKDLTEEKEV

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

73.9

32.9

Major BPS

77.7

0.69

30.2

Major PPT

64.1

0.32

1.1

62.7

42.1

Minor 5ss

40.8

-1

2.8

45.6

43.6

Minor BPS

51.3

-0.1

1.6

53.79

41.8

Associated Gene:

Gene:

SLC13A3

Ensembl Gene ID:

ENSAPLG00000009083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009500

1657435 - 1685031

27597