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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1682806_1683363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1682806 - 1683363

Intron Length:

558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

CTAAACTCACCA

Flanking Amino Acid:

SSGHLMVKDMARTGLLMNLM

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

74.9

36.2

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

85.2

0.79

0.7

81.1

30.9

Minor 5ss

40.7

-1

2.8

49.7

41.9

Minor BPS

44.1

-0.4

54.44

43.6

Associated Gene:

Gene:

SLC13A3

Ensembl Gene ID:

ENSAPLG00000009083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009500

1657435 - 1685031

27597