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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1733032_1734177_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1733032 - 1734177

Intron Length:

1146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTACCGCCA

5'SS Class:

weak_major

3'SS Sequence:

ATCTGACGGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

TCTGCATGCATC

Flanking Amino Acid:

TLPDGKKEEGNTTSPCGWGC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.6

0.11

1.3

42.5

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

56.3

0.14

1.1

51.2

42.4

Minor 5ss

37.2

-1.4

3.5

47.8

42.3

Minor BPS

-0.5

2.1

55.85

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031881

1732818 - 1734323

1506