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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1797434_1797581_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1797434 - 1797581

Intron Length:

148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

GCTCCCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCACAC

U12 Branch Point Sequence:

CCGCCCACACCG

Flanking Amino Acid:

VGQNLSIHSGRYRSVVDMVR

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

77.9

31.9

Major BPS

47.2

-0.1

52.2

32.7

Major PPT

79.2

0.66

0.8

72.5

32.1

Minor 5ss

30.5

-2.2

3.5

41.8

45.1

Minor BPS

38.6

-1

37.63

44.6

Associated Gene:

Gene:

R3HDML

Ensembl Gene ID:

ENSAPLG00000017051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026549

1796120 - 1798954

2835