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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1797715_1798617_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1797715 - 1798617

Intron Length:

903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTGGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CAGTGCTGACCA

Flanking Amino Acid:

SGSVCSHYTQMVWASSNRLG

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

66.3

0.4

1.1

41.8

Major PPT

66.1

0.36

60.2

40.4

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

44.3

-0.4

2.1

52.92

45.2

Associated Gene:

Gene:

R3HDML

Ensembl Gene ID:

ENSAPLG00000017051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026549

1796120 - 1798954

2835