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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1798734_1798821_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1798734 - 1798821

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGCGAT

U12 Branch Point Sequence:

CTCTCCTCTCTC

Flanking Amino Acid:

AVLLVCNYAIKGNWIGEAPY

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

72.5

37.3

Major BPS

40.4

-0.6

1.5

29.6

44.5

Major PPT

76.9

0.6

0.7

68.7

31.7

Minor 5ss

34.7

-1.7

3.2

38.7

Minor BPS

36.1

-1.1

3.5

54.13

44.4

Associated Gene:

Gene:

R3HDML

Ensembl Gene ID:

ENSAPLG00000017051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026549

1796120 - 1798954

2835