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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1814580_1818419_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1814580 - 1818419

Intron Length:

3840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

GTCCTTCCCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

TCTGTCTCACCC

Flanking Amino Acid:

ENMQVLAMGNADTSPSEAAN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

71.5

38.5

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

62.4

0.28

60.1

35.8

Minor 5ss

35.6

-1.6

2.9

43.1

37.8

Minor BPS

48.3

-0.1

1.9

61.43

44.4

Associated Gene:

Gene:

HNF4A

Ensembl Gene ID:

ENSAPLG00000008950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043587

1814459 - 1830752

16294

ENSAPLT00000009343

1814459 - 1831371

16913