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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1822916_1825102_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1822916 - 1825102

Intron Length:

2187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTCTT

5'SS Class:

major

3'SS Sequence:

TATTTCCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

GCTCCTTTATTT

Flanking Amino Acid:

LLQAEVLAQQISTPVPVMNG

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.2

72.9

44.2

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

86.4

0.82

0.8

36.1

Minor 5ss

44.6

-0.6

3.2

67.8

43.1

Minor BPS

56.5

0.28

1.6

69.71

41.8

Associated Gene:

Gene:

HNF4A

Ensembl Gene ID:

ENSAPLG00000008950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043587

1814459 - 1830752

16294

ENSAPLT00000009343

1814459 - 1831371

16913