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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1829768_1830444_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1829768 - 1830444

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGCATGTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

TGGCACCTAATA

Flanking Amino Acid:

DNLLQEMLLGGSSSETPHAH

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

90.4

20.6

Major BPS

73.1

0.57

71.9

31.3

Major PPT

71.4

0.48

0.9

65.2

Minor 5ss

33.2

-1.9

3.4

48.7

47.5

Minor BPS

48.1

-0.1

1.8

59.74

39.7

Associated Gene:

Gene:

HNF4A

Ensembl Gene ID:

ENSAPLG00000008950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043587

1814459 - 1830752

16294

ENSAPLT00000009343

1814459 - 1831371

16913