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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1884784_1885870_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1884784 - 1885870

Intron Length:

1087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACCAT

U12 Branch Point Sequence:

TTTCCTCCCACT

Flanking Amino Acid:

DISDLTVEGADSEAPSTSSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.2

38.5

Major BPS

57.8

0.19

1.3

67.1

39.2

Major PPT

78.8

0.65

0.7

72.8

25.4

Minor 5ss

38.8

-1.3

50.2

46.4

Minor BPS

46.4

-0.2

2.2

74.5

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000658

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000631

1884633 - 1885950

1318