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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1959740_1960388_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1959740 - 1960388

Intron Length:

649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

CATTTTGGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

CTGTTCTGACAT

Flanking Amino Acid:

GRQTLATTSMGDVEIGLQER

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

38.2

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

70.8

0.47

69.5

41.3

Minor 5ss

32.1

-2

3.1

34.7

41.5

Minor BPS

47.7

-0

1.8

65.25

45.2

Associated Gene:

Gene:

RIMS4

Ensembl Gene ID:

ENSAPLG00000008678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009022

1956412 - 2003307

46896