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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2049712_2050444_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2049712 - 2050444

Intron Length:

733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

ACCTCTTTGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATGAT

U12 Branch Point Sequence:

TTGTGCTCACCT

Flanking Amino Acid:

AYINFQQPADAERALDTMNF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

58.5

40.7

Major BPS

72.3

0.55

1.1

63.4

42.8

Major PPT

71.2

0.48

64.9

40.7

Minor 5ss

33.8

-1.8

40.2

39.7

Minor BPS

49.6

0.05

2.2

75.86

46.7

Associated Gene:

Gene:

PABPC1L

Ensembl Gene ID:

ENSAPLG00000008415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033296

2049325 - 2057378

8054

ENSAPLT00000008772

2049325 - 2058139

8815