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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2050639_2051023_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2050639 - 2051023

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTGCTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTTTTAATT

Flanking Amino Acid:

SAFGNILSCKVVCDENGSRG

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

68.6

34.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.7

0.47

0.9

64.8

36.4

Minor 5ss

37.8

-1.4

3.3

51.1

45.6

Minor BPS

77.9

0.95

1.1

86.64

33.8

Associated Gene:

Gene:

PABPC1L

Ensembl Gene ID:

ENSAPLG00000008415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033296

2049325 - 2057378

8054

ENSAPLT00000008772

2049325 - 2058139

8815