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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2051140_2051883_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2051140 - 2051883

Intron Length:

744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

TTGCTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

CTTTGCTTGCTT

Flanking Amino Acid:

MNGMLLNDRKVFVGHFKSRK

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.56

1.1

37.2

Major BPS

0.65

1.1

77.4

37.3

Major PPT

82.8

0.74

0.8

77.6

31.2

Minor 5ss

-1.7

3.2

42.4

44.3

Minor BPS

42.4

-0.5

3.6

74.24

43.6

Associated Gene:

Gene:

PABPC1L

Ensembl Gene ID:

ENSAPLG00000008415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033296

2049325 - 2057378

8054

ENSAPLT00000008772

2049325 - 2058139

8815