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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2052024_2052751_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2052024 - 2052751

Intron Length:

728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAG

U12 Branch Point Sequence:

TGTTTCAGCACA

Flanking Amino Acid:

DRLREIFSKFGKTLSVKVMM

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

72.6

38.9

Major BPS

58.3

0.21

1.7

71.4

45.1

Major PPT

85.5

0.8

0.7

80.4

24.9

Minor 5ss

31.3

-2.1

3.3

40.9

45.3

Minor BPS

46.6

-0.2

2.1

65.77

40.2

Associated Gene:

Gene:

PABPC1L

Ensembl Gene ID:

ENSAPLG00000008415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033296

2049325 - 2057378

8054

ENSAPLT00000008772

2049325 - 2058139

8815