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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2052847_2053115_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2052847 - 2053115

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

GTGCTCAGAGCC

Flanking Amino Acid:

NFEKHEEAQKAVADMNGKEI

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.9

80.1

38.1

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

68.7

0.42

64.5

36.5

Minor 5ss

29.4

-2.4

3.9

42.1

Minor BPS

41.8

-0.6

1.8

50.55

39.4

Associated Gene:

Gene:

PABPC1L

Ensembl Gene ID:

ENSAPLG00000008415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033296

2049325 - 2057378

8054

ENSAPLT00000008772

2049325 - 2058139

8815