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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2053254_2053720_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2053254 - 2053720

Intron Length:

467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGGAG

U12 Branch Point Sequence:

TTCTGCTTGTTT

Flanking Amino Acid:

IKQERVSRYQGVNLYVKNLD

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

-0.3

1.7

47.8

Major PPT

0.72

0.9

76.2

37.8

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

42.4

-0.5

3.6

74.27

43.5

Associated Gene:

Gene:

PABPC1L

Ensembl Gene ID:

ENSAPLG00000008415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033296

2049325 - 2057378

8054

ENSAPLT00000008772

2049325 - 2058139

8815