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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2053817_2054411_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2053817 - 2054411

Intron Length:

595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGAC

5'SS Class:

strong_major

3'SS Sequence:

AATCCAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTGTTCTAATCC

Flanking Amino Acid:

SPYGTITSAKVMTEGGHSKG

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

72.6

32.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

65.3

0.35

0.9

60.7

39.5

Minor 5ss

24.1

-3

3.3

43.4

Minor BPS

54.6

0.12

1.9

69.29

42.7

Associated Gene:

Gene:

PABPC1L

Ensembl Gene ID:

ENSAPLG00000008415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033296

2049325 - 2057378

8054

ENSAPLT00000008772

2049325 - 2058139

8815