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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2054679_2055203_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2054679 - 2055203

Intron Length:

525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCTCCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

TCTCCCTCCATA

Flanking Amino Acid:

PGYFLPPIPQPQTRATFYSP

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

74.9

35.3

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

73.9

0.54

0.7

68.7

25.1

Minor 5ss

-2.3

2.7

36.3

40.6

Minor BPS

49.6

-0

64.86

41.9

Associated Gene:

Gene:

PABPC1L

Ensembl Gene ID:

ENSAPLG00000008415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033296

2049325 - 2057378

8054

ENSAPLT00000008772

2049325 - 2058139

8815