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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2055699_2056198_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2055699 - 2056198

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

GAGTTTTTAACC

Flanking Amino Acid:

PRVSPTAQRVANIGTQTVSA

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.1

34.7

Major BPS

87.3

0.93

0.8

36.5

Major PPT

81.8

0.72

0.7

76.1

Minor 5ss

27.1

-2.6

2.9

24.2

36.8

Minor BPS

0.55

1.2

67.63

Associated Gene:

Gene:

PABPC1L

Ensembl Gene ID:

ENSAPLG00000008415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033296

2049325 - 2057378

8054

ENSAPLT00000008772

2049325 - 2058139

8815