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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2056336_2056641_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2056336 - 2056641

Intron Length:

306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCACCT

5'SS Class:

major

3'SS Sequence:

TTGCTTTACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAT

U12 Branch Point Sequence:

GTTGCTTTACCC

Flanking Amino Acid:

LGSVPPGAPQVGEPAVHIQG

Intron Amino Acid Position:

532

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.2

44.9

Major BPS

0.27

1.3

53.3

44.2

Major PPT

75.9

0.58

0.9

69.5

40.7

Minor 5ss

38.8

-1.3

3.4

57.7

46.5

Minor BPS

60.3

0.3

1.7

70.5

41.3

Associated Gene:

Gene:

PABPC1L

Ensembl Gene ID:

ENSAPLG00000008415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033296

2049325 - 2057378

8054

ENSAPLT00000008772

2049325 - 2058139

8815