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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2056736_2057133_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2056736 - 2057133

Intron Length:

398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GTGCTCGGAGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TAGTGCTCACTG

Flanking Amino Acid:

APPQEQKQMIGERLYPLIHA

Intron Amino Acid Position:

563

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

75.7

34.4

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

56.1

0.14

1.1

42.7

Minor 5ss

30.4

-2.2

3.5

42.4

45.1

Minor BPS

-0.6

2.2

48.31

45.5

Associated Gene:

Gene:

PABPC1L

Ensembl Gene ID:

ENSAPLG00000008415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033296

2049325 - 2057378

8054

ENSAPLT00000008772

2049325 - 2058139

8815