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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2062661_2063177_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2062661 - 2063177

Intron Length:

517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TAACACTTAAAA

Flanking Amino Acid:

RRAQALKELKDYKSSIADIN

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

77.9

38.6

Major BPS

0.65

1.5

85.7

34.9

Major PPT

84.4

0.77

0.7

77.6

36.1

Minor 5ss

33.6

-1.9

2.9

40.4

45.7

Minor BPS

57.6

0.24

1.6

66.22

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008706

2062562 - 2066312

3751