Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_2065329_2065851_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2065329 - 2065851

Intron Length:

523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCCAC

5'SS Class:

major

3'SS Sequence:

TCGCCCCTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

TCGCCCCTCACA

Flanking Amino Acid:

ACRLCVTDCCGALKLVPFSI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

59.3

41.8

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

71.4

0.48

0.8

64.4

Minor 5ss

32.3

-2

33.6

41.9

Minor BPS

48.1

-0.1

2.1

61.33

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008706

2062562 - 2066312

3751