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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2066365_2068085_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2066365 - 2068085

Intron Length:

1721

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGACG

5'SS Class:

strong_major

3'SS Sequence:

CTTACGTATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

ATTTCTCTATTC

Flanking Amino Acid:

MDGVQLRNPRRQLKKLDEDS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

67.4

43.6

Major BPS

73.8

0.59

0.9

26.8

Major PPT

71.9

0.49

64.9

40.3

Minor 5ss

33.1

-1.9

3.1

44.3

Minor BPS

0.07

1.9

69.19

36.6

Associated Gene:

Gene:

STK4

Ensembl Gene ID:

ENSAPLG00000008260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043005

2066333 - 2108713

42381

ENSAPLT00000008623

2066333 - 2108713

42381