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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2117632_2120963_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2117632 - 2120963

Intron Length:

3332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTCAT

U12 Branch Point Sequence:

TCATCGTCACCC

Flanking Amino Acid:

GLRSLGATLKHSYREVGILL

Intron Amino Acid Position:

446

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

69.5

41.5

Major BPS

67.4

0.43

1.2

38.9

Major PPT

82.7

0.74

0.8

73.4

37.1

Minor 5ss

31.4

-2.1

3.2

40.6

45.6

Minor BPS

44.7

-0.4

2.4

59.12

45.7

Associated Gene:

Gene:

KCNS1

Ensembl Gene ID:

ENSAPLG00000027411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028519

2117176 - 2129718

12543

ENSAPLT00000018088

2117176 - 2130640

13465

ENSAPLT00000043784

2117176 - 2122967

5792