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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2121956_2130297_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2121956 - 2130297

Intron Length:

8342

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

GTCTCGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTCGAG

U12 Branch Point Sequence:

GCCCCCTCGAGC

Flanking Amino Acid:

ARCGGGGAAAGGPAPALLIM

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

40.1

-0.6

1.6

35.5

41.6

Major PPT

68.8

0.42

0.9

61.7

34.9

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

44.6

-0.4

1.8

48.14

41.8

Associated Gene:

Gene:

KCNS1

Ensembl Gene ID:

ENSAPLG00000027411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018088

2117176 - 2130640

13465