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Intron Name: Anas_platyrhynchos_platyrhynchos_21_213582_216723_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

213582 - 216723

Intron Length:

3142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGCATC

5'SS Class:

major

3'SS Sequence:

CTTTTCCCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAC

U12 Branch Point Sequence:

CTTTCTTTTCCC

Flanking Amino Acid:

WTGMIIGPPRTIYENRIYSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

69.9

41.1

Major BPS

65.7

0.39

1.2

67.4

36.7

Major PPT

83.4

0.75

0.7

81.4

23.6

Minor 5ss

45.2

-0.5

2.8

57.7

40.9

Minor BPS

44.1

-0.4

3.6

69.99

42.1

Associated Gene:

Gene:

UBE2V1

Ensembl Gene ID:

ENSAPLG00000027469

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038982

211388 - 217384

5997

ENSAPLT00000019816

210013 - 217384

7372