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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2144092_2144402_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2144092 - 2144402

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTCGCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

GGGTGCTCAGGG

Flanking Amino Acid:

SEWARRAKESGIVMFAVGVG

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

73.1

0.52

0.8

65.4

30.5

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

36.7

-1.1

2.2

44.8

Associated Gene:

Gene:

MATN4

Ensembl Gene ID:

ENSAPLG00000008140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043779

2142354 - 2160565

18212

ENSAPLT00000008448

2143356 - 2148452

5097