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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2145324_2145404_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2145324 - 2145404

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

CCTTGTCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

ACAGGGGTAACC

Flanking Amino Acid:

TLQPDGSSCRATDLCNGVDH

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

65.8

40.2

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

74.2

0.54

0.8

65.2

36.3

Minor 5ss

29.6

-2.3

2.7

28.8

35.5

Minor BPS

35.5

-1.1

2.6

44.54

43.9

Associated Gene:

Gene:

MATN4

Ensembl Gene ID:

ENSAPLG00000008140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043779

2142354 - 2160565

18212

ENSAPLT00000008448

2143356 - 2148452

5097