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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2145528_2145782_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2145528 - 2145782

Intron Length:

255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTACGTGTC

5'SS Class:

major

3'SS Sequence:

CTTCTCTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGCCAG

U12 Branch Point Sequence:

GCCTCCTTCTCT

Flanking Amino Acid:

YLNQDKRTCSMIDYCSFGNH

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.1

64.8

Major BPS

40.5

-0.6

1.6

47.5

Major PPT

80.7

0.69

0.7

31.8

Minor 5ss

38.4

-1.3

3.5

57.4

41.5

Minor BPS

42.2

-0.5

3.6

68.06

48.5

Associated Gene:

Gene:

MATN4

Ensembl Gene ID:

ENSAPLG00000008140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043779

2142354 - 2160565

18212

ENSAPLT00000008448

2143356 - 2148452

5097