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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2146284_2146787_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2146284 - 2146787

Intron Length:

504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGGGTGAG

5'SS Class:

major

3'SS Sequence:

CTCTGTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

CCACTCTGACCC

Flanking Amino Acid:

FGKQFQDKLCGVDMCVERDH

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

1.1

59.7

41.3

Major BPS

69.1

0.47

60.7

37.6

Major PPT

82.2

0.72

0.8

76.3

32.3

Minor 5ss

25.7

-2.8

3.2

30.8

43.2

Minor BPS

-0.4

1.7

48.77

41.2

Associated Gene:

Gene:

MATN4

Ensembl Gene ID:

ENSAPLG00000008140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043779

2142354 - 2160565

18212

ENSAPLT00000008448

2143356 - 2148452

5097