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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2147358_2148365_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2147358 - 2148365

Intron Length:

1008

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

TGCCCTCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTAAA

U12 Branch Point Sequence:

GCAGGCTAAACC

Flanking Amino Acid:

TTLEARPKPAALKCRTGPLD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

52.4

0.06

1.3

55.6

40.2

Major PPT

78.9

0.65

0.8

72.7

32.1

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

44.7

-0.4

2.1

51.27

45.6

Associated Gene:

Gene:

MATN4

Ensembl Gene ID:

ENSAPLG00000008140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043779

2142354 - 2160565

18212

ENSAPLT00000008448

2143356 - 2148452

5097