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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2157782_2161832_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2157782 - 2161832

Intron Length:

4051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGCGG

5'SS Class:

major

3'SS Sequence:

CTCTGTCTCGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCGAT

U12 Branch Point Sequence:

TGCTGTGGGACC

Flanking Amino Acid:

QSRSPPRYWLRSNPYQANLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

55.4

48.8

Major BPS

58.6

0.21

1.5

58.2

48.3

Major PPT

73.6

0.53

0.8

68.8

31.6

Minor 5ss

29.1

-2.4

3.4

38.7

46.4

Minor BPS

39.1

-0.8

2.3

50.36

Associated Gene:

Gene:

RBPJL

Ensembl Gene ID:

ENSAPLG00000008031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008359

2150568 - 2167259

16692